Function reference • arfpam

Operators
`%+=%` `%-=%`	Addition/Subtraction Assignment Operators
`%p%`	Operator to Concatenate Two Strings
`%w%`	Operator to Check if String is Part of Another String
`%rows%`	Operator to Subset Rows While Preserving Attributes
`%btw%`	Operator to Determine Range Between Which a Value Falls
Math
`erf()`	Error Function
`logit()`	Logit Function
`logistic()`	Logistic Function
`log_of_sum_of_exp_x()`	Compute the Log of the Sum of the Exponent of Log-Values
`pow()`	Raise a Value to a Power
`softmax()`	Softmax Function
Utilities
`add_to_list()`	Add Element to Existing List
`align_strings()`	Pad Strings to be the Same Length
`assign_by_interval()`	Assign Values by Cases Within Intervals
`column()`	Extract Column Names Meeting Inclusion/Exclusion Criteria
`column_by_other()`	Unique Values of one Column by Another
`copy_from_source()`	Copy Files From Source Folder
`create_table_of_contents()`	Create a Table of Contents
`create_vector()`	Create Code for Vector
`data_first()`	Adapt Functions to Take Data Argument First
`date_and_time()`	Formatted Date and Time for File Names
`duplicate_wide_to_long()`	Duplicate Values from Wide-Form to Long-Form Data
`empty_list()`	Create an Empty List
`every()` `every<-`()	Sequence of Values in Regular Increments
`find_increment()`	Find Increment Over Range of Values
`find_file_name()`	Check if a File Name can be Found
`format_numbers()`	Pad Numeric Values to be the Same Length
`group_index()`	Create Index Over Groupings
`has_NA()`	Identify NA Values by Row
`lin()`	Create Linear Sequence of Evenly Spaced Values
`load_package()`	Convenience Function to Load in R Packages
`load_R_object()`	Load in R Objects From .RData Files
`make_file_name()`	Create Formatted File Name
`match_and_reorder()`	Match and Reorder Vectors
`match_rows()`	Match Rows Across Two Data Frames
`new_limits()`	Rescale Values to Have New Limits
`not_NA()`	Return a Logical Vector With NA Values set to FALSE
`over()`	A Sequence Adjusted by an Iterator
`path_to_file()`	Returns File/Folder Paths
`percent_that_sums_to_100()`	Compute Percentage That Sums to 100%
`print_table()`	Print a Nicely Formatted Table
`pull_id()`	Extract Subject IDs From a Data-Frame
`source_R_scripts()`	Source in Multiple R Scripts in a Folder
`recode()`	Recode a Variable
`replace_cases()`	Replace Cases
`replace_string()`	Replace String Contents
`runs_in_sequence()`	Determine Runs in a Sequence
`save_png_figure()`	Create and save PNG file
`section()`	Section Numbers for Tracking Progress
`strip_value()`	Strip Vector of a Value
`squish()`	Collapse a Character Vector
`take_x_by_y()`	Repeat Column Values by Unique Cases in Another Column
`templates()`	Create Templates for Annotations and Code
`term_coding()` `term_coding_dummy()` `term_coding_effect()`	Parameters for Recoding Variables
`term_combo()`	Template for Combining Terms
`term_new()`	Template for Creating New Term
`term_prep()`	Create New Terms for Data
`update_package_version()`	Update Package Versions in Script Documentation
Plotting
`col_to_hex()`	Convert Colors to Hex Codes
`draw_axes()`	Add Axes to a Plot
`draw_borders_and_labels()`	Add Borders and Labels to an Existing Plot
`draw_boxplots()`	Add Boxplot to an Existing Plot
`draw_by_group()`	Add Elements to Existing Figure by Groups
`draw_error_bars()`	Add Error Bars to a Plot
`draw_dots()`	Add Points and Error Bars to an Existing Plot
`draw_hv()`	Draw Horizontal/Vertical Lines
`draw_legend()`	Add a Legend to an Existing Plot
`draw_lines()`	Add Lines and Error Bars to an Existing Plot
`palettes()`	Various Color Palettes
`plot_blank()`	Generate a Blank Plot
`plot_correlations()`	General-purpose Function to Plot Correlations
`plot_histogram()`	Wrapper for Plotting Histograms
`plot_forest()`	Create a Forest Plot
`plot_scatter()`	Create a Scatter Plot
`save_pdf()`	Save PDF file
`save_png()`	Save PNG file
`specify_positions()`	Specify Positions over Grouping Factors
Statistics
`bootstrap()`	Non-Parametric Bootstrap
`bounds()`	Lower and Upper Limits for Confidence or Credible Intervals
`boxcox_transform()`	Box-Cox Transformations for Linear Model
`density_points()`	Estimate Densities for Individual Observations
`pool_over_imputations()`	Pool Parameter Estimates Over Imputations
`principal_components_analysis()`	Principal Components Analysis
`pvalues()`	Compute and Format P-values
`sem()`	Standard Error of the Mean
`summa()`	Flexible Formatted Summary Statistics
`standardize()`	Standardize Columns in a Data Frame or Matrix
`statistic()`	Compute a Statistic
`stats_by_group()`	Compute Statistics by Group
`yeo_johnson()`	Yeo-Johnson Transform
`yeo_johnson_transform()`	Determine Best Parameter for Yeo-Johnson Transform
Modeling
`binary_SDT()`	Transform Hit/False Alarm Rates into SDT Parameters
`EZ_diffusion()`	Estimate Parameters for EZ-Diffusion Model
Projects
`create_analysis_project()`	Create Files and Folders for Analysis Project
Miscellaneous
`arfpam` `arfpam-package`	Assorted R Functions for Processing, Analysis, and Modeling
Legacy
`add_axes()`	Add Axes to a Plot
`blank_plot()`	Generate a Blank Plot
`error_bars()`	Add Error Bars to a Plot
`fill_plot()`	Add Filled Vertical/Horizontal Bar
`hv_line()`	Draw Horizontal/Vertical Lines
`plot_correlation_heatmap()`	Plot a Heatmap for a Correlation Matrix

Reference

Operators

Math

Utilities

Plotting

Statistics

Modeling

Projects

Miscellaneous

Legacy